Format Conversion

Transform sequences between different formats (FASTA, GenBank, EMBL)

18
Tools
Tags:
DNA(13)Protein(6)RNA(6)
GenBank to FASTA
5.0
Convert GenBank files to FASTA format, extracting DNA sequences
DNARNA
18,363 uses
GenBank Feature Extractor
4.7
Extract sequence features from GenBank files including introns, exons, and coding sequences
DNARNA
13,364 uses
GenBank Trans Extractor
4.0
Extract protein translations from GenBank files
DNARNA
12,384 uses
One to Three
0.0
Convert single letter amino acid codes to three letter codes
Protein
4,432 uses
Range Extractor DNA
4.4
Extract DNA sequence segments by position or range
DNA
2,342 uses
Range Extractor Protein
4.4
Extract protein sequence segments by position or range
Protein
19,743 uses
Reverse Complement
4.6
Convert DNA sequences to reverse, complement, or reverse-complement
DNAProtein
16,743 uses
Split Codons
5.0
Separate bases according to codon position
DNARNA
12,334 uses
Split FASTA
5.0
Convert a FASTA sequence into multiple sequences
DNARNA
23,211 uses
Three to One
5.0
Convert three letter amino acid codes to one letter codes
Protein
12,311 uses
Window Extractor DNA
5.0
Extract a window of sequence around a position
DNA
3,453 uses
Window Extractor Protein
5.0
Extract a window of sequence around a position
Protein
45,644 uses
Combine FASTA
4.7
Combine multiple FASTA sequence records into a single sequence
DNARNA
12,645 uses
EMBL to FASTA
4.7
Convert EMBL format files to FASTA format, extracting DNA sequences
DNA
16,353 uses
EMBL Feature Extractor
5.0
Extract sequence features from EMBL files and convert to FASTA format
DNA
23,422 uses
EMBL Trans Extractor
4.0
Extract protein translations from EMBL files and convert to FASTA format
DNA
12,343 uses
Filter DNA
5.0
Remove non-DNA characters from text to make sequences suitable for other applications
DNA
23,342 uses
Filter Protein
5.0
Remove non-protein characters from text to make sequences suitable for other applications
Protein
10,283 uses
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